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Ítem Water saving using thermal imagery-based thresholds for timing irrigation in potatoes under drip and furrow irrigation systems(MDPI, 2022-11-23) Rinza, Javier; Ramírez, David A.; Ninanya, Johan; De Mendiburu, Felipe; García, Jerónimo; Quiroz, RobertoUnder the current water crisis in agriculture, irrigation methods for saving and conserving water are necessary. However, these methods must guarantee an appropriate yield with a concomitant economic benefit and a reduced environmental impact. In this study, two irrigation thresholds for irrigation timing (IT) based on thermal imagery were analyzed with the UNICA potato variety in three trials under drip (DI) and furrow (FI) irrigation during 2017–2018 in Lima, Peru. The control (T1) remained at >70% of soil field capacity. For other treatments, thresholds were defined based on stomatal conductance at light saturation (T2: 0.15 and T3: 0.05 mol H2O m−2 s−1) and crop water stress index (T2: 0.4 and T3: 0.6) based on canopy temperature. An integrated index (IIN) was established for the valuation of treatments using the criteria of high fresh tuber yield (FTY) and a low total amount of irrigated water, production cost (PC), and total C emissions (TE) and using criteria of a score. FI-T2 (0.69–0.72) and DI-T3 (0.19–0.29) showed the highest and lowest IIN value, respectively. FTY in T2 was not significantly reduced under FI, resulting in a lower PC regarding DI–T2 and emphasizing the usefulness of thermal imagery in determining watering schedules in potatoes under furrow irrigation systems.Ítem The phylogeography of potato virus X shows the fingerprints of its human vector(MDPI, 2021-09-09) Fuentes, Segundo; Gibbs, Adrian J.; Hajizadeh, Mohammad; Perez, Ana; Adams, Ian P.; Fribourg, Cesar E.; Kreuze, Jan; Fox, Adrian; Boonham, Neil; Jones, Roger A. C.Potato virus X (PVX) occurs worldwide and causes an important potato disease. Complete PVX genomes were obtained from 326 new isolates from Peru, which is within the potato crop′s main domestication center, 10 from historical PVX isolates from the Andes (Bolivia, Peru) or Europe (UK), and three from Africa (Burundi). Concatenated open reading frames (ORFs) from these genomes plus 49 published genomic sequences were analyzed. Only 18 of them were recombinants, 17 of them Peruvian. A phylogeny of the non-recombinant sequences found two major (I, II) and five minor (I-1, I-2, II-1, II-2, II-3) phylogroups, which included 12 statistically supported clusters. Analysis of 488 coat protein (CP) gene sequences, including 128 published previously, gave a completely congruent phylogeny. Among the minor phylogroups, I-2 and II-3 only contained Andean isolates, I-1 and II-2 were of both Andean and other isolates, but all of the three II-1 isolates were European. I-1, I-2, II-1 and II-2 all contained biologically typed isolates. Population genetic and dating analyses indicated that PVX emerged after potato’s domestication 9000 years ago and was transported to Europe after the 15th century. Major clusters A–D probably resulted from expansions that occurred soon after the potato late-blight pandemic of the mid-19th century. Genetic comparisons of the PVX populations of different Peruvian Departments found similarities between those linked by local transport of seed potato tubers for summer rain-watered highland crops, and those linked to winter-irrigated crops in nearby coastal Departments. Comparisons also showed that, although the Andean PVX population was diverse and evolving neutrally, its spread to Europe and then elsewhere involved population expansion. PVX forms a basal Potexvirus genus lineage but its immediate progenitor is unknown. Establishing whether PVX′s entirely Andean phylogroups I-2 and II-3 and its Andean recombinants threaten potato production elsewhere requires future biological studies.Ítem Unraveling ecophysiological mechanisms in potatoes under different irrigation methods: a preliminary field evaluation(MDPI, 2020-06-11) Silva Díaz, Cecilia; Ramírez, David A.; Rodríguez Delfín, Alfredo; De Mendiburu, Felipe; Rinza, Javier; Ninanya, Johan; Loayza, Hildo; Quiroz, RobertoPotatoes—a global food security and staple crop—is threatened by dry spells in drought-prone areas. The use of physiological thresholds to save water while maintaining a reasonable tuber yield has been proposed, but their effects on physiological performances and usefulness under different irrigation methods are yet to be evaluated. In this study, photosynthetic traits were monitored to assess the effect of water restriction and rewatering under drip (DI) and furrow (FI) irrigations. The treatments consisted of two maximum light-saturated stomatal conductance (g𝑠_𝑚𝑎𝑥) irrigation thresholds (T2: 0.15 and T3: 0.05 mol H2O m−2 s−1) compared with a fully irrigated control (g𝑠_𝑚𝑎𝑥 > 0.3 mol H2O m−2 s−1). DI used less water than FI but promoted early senescence and low percentage of maximum assimilation rate (PMA) at late developmental stages. FI caused no yield penalization in T2 and higher recovery of carbon isotope discrimination and PMA than DI. It is suggested that moderate water quantities of early and frequently water pulses in the irrigation, promote short-term water stress memory improvement, senescence delay and more capability of recovery at late stages.Ítem Canopy temperature as a key physiological trait to improve yield prediction under water restrictions in potato(MDPI, 2021-07-20) Ninanya, Johan; Ramírez, David A.; Rinza, Javier; Silva-Díaz, Cecilia; Cervantes, Marcelo; García, Jerónimo; Quiroz, RobertoCanopy temperature (CT) as a surrogate of stomatal conductance has been highlighted as an essential physiological indicator for optimizing irrigation timing in potatoes. However, assessing how this trait could help improve yield prediction will help develop future decision support tools. In this study, the incorporation of CT minus air temperature (dT) in a simple ecophysiological model was analyzed in three trials between 2017 and 2018, testing three water treatments under drip (DI) and furrow (FI) irrigations. Water treatments consisted of control (irrigated until field capacity) and two-timing irrigation based on physiological thresholds (CT and stomatal conductance). Two model perspectives were implemented based on soil water balance (P1) and using dT as the penalizing factor (P2), affecting the biomass dynamics and radiation use efficiency parameters. One of the trials was used for model calibration and the other two for validation. Statistical indicators of the model performance determined a better yield prediction at harvest for P2, especially under maximum stress conditions. The P1 and P2 perspectives showed their highest coefficient of determination (R2) and lowest root-mean-squared error (RMSE) under DI and FI, respectively. In the future, the incorporation of CT combining low-cost infrared devices/sensors with spatial crop models, satellite image information, and telemetry technologies, an adequate decision support system could be implemented for water requirement determination and yield prediction in potatoes.Ítem Development of an open-source thermal image processing software for improving irrigation management in potato crops (Solanum tuberosum L.)(MDPI, 2020-01-14) Cucho Padin, Gonzalo; Rinza, Javier; Ninanya, Johan; Loayza, Hildo; Quiroz, Roberto; Ramirez, David A.Accurate determination of plant water status is mandatory to optimize irrigation scheduling and thus maximize yield. Infrared thermography (IRT) can be used as a proxy for detecting stomatal closure as a measure of plant water stress. In this study, an open-source software (Thermal Image Processor (TIPCIP)) that includes image processing techniques such as thermal-visible image segmentation and morphological operations was developed to estimate the crop water stress index (CWSI) in potato crops. Results were compared to the CWSI derived from thermocouples where a high correlation was found (𝑟𝑃𝑒𝑎𝑟𝑠𝑜𝑛 = 0.84). To evaluate the effectiveness of the software, two experiments were implemented. TIPCIP-based canopy temperature was used to estimate CWSI throughout the growing season, in a humid environment. Two treatments with different irrigation timings were established based on CWSI thresholds: 0.4 (T2) and 0.7 (T3), and compared against a control (T1, irrigated when soil moisture achieved 70% of field capacity). As a result, T2 showed no significant reduction in fresh tuber yield (34.5 ± 3.72 and 44.3 ± 2.66 t ha−1), allowing a total water saving of 341.6 ± 63.65 and 515.7 ± 37.73 m3 ha−1 in the first and second experiment, respectively. The findings have encouraged the initiation of experiments to automate the use of the CWSI for precision irrigation using either UAVs in large settings or by adapting TIPCIP to process data from smartphone-based IRT sensors for applications in smallholder settings.